Package index
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check_tax_auth()
- resolves taxonomicAuthor field when there are varying taxonimic fields returned from GBIF query
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clean_occs()
- Cleans a GBIF occurrence download using CoordinateCleaner and native range filter.
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get_gbif_occs()
- Download georeferenced occurrence data using GBIF name identifier
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get_name_keys()
- Get accepted GBIF and POWO identifiers (keys) for taxon names to support data downloads
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get_native_range()
- Get native ranges for taxa
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get_occs_range()
- Get ISO two-digit code from occurrence lat longs
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make_LC_points()
- Combined function to get clean SIS points file using name identifiers
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make_metrics()
- Generate metrics from a clean point occurrence file
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make_sis_csvs()
- Generate all SIS connect csv files
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make_sis_occs()
- Convert cleaned gbif DWCA structure to IUCN SIS format
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make_zip()
- Generate the SIS connect zip file
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name_search_gbif()
- Query taxon name against GBIF backbone
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name_search_powo()
- Query taxon name against POWO (Plants of the World Online) backbone
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occs_gbif_ref()
- Generate GBIF download citation according to IUCN format
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powo_lookup()
- Lookup name in POWO (Plants of the World Online) using WCVP ID
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powo_range()
- Return native range of an accepted plant species from POWO (Plants of the World Online) using WCVP identifier
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powo_ref()
- Generate POWO download citation according to IUCN format
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reorder_status()
- Reorder taxonomic status to give priority to accepted name
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sis_allfields()
- Generate the allfields.csv file
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sis_assessments()
- Generate the assessments.csv file
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sis_countries()
- Generate the countries.csv file
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sis_credits()
- Generate the credits.csv file
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sis_habitats()
- Generate the habitats.csv file
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sis_plantspecific()
- Generate the plantspecific.csv file
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sis_references()
- Generate the references.csv file
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sis_taxonomy()
- Generate the taxonomy.csv file