Package index • LCr

All functions

check_occs(): Checks and flags GBIF occurrence data based on common coordinate issues

clean_keys(): Clean a keys output to ensure only accepted species from GBIF and WCVP are being analysed

clean_occs(): Clean GBIF occurrences based on user-selected flags and/or specific gbifIDs

get_gbif_occs(): Download georeferenced occurrence data using GBIF name identifier

get_name_keys(): Get accepted GBIF and POWO identifiers (keys) for taxon names to support data downloads

get_native_range(): Get native ranges for taxa

get_occs_range(): Get ISO two-digit code from occurrence lat longs

make_metrics(): Generate metrics from a clean point occurrence file

make_sis_csvs(): Generate all SIS connect csv files

make_sis_occs(): Convert cleaned gbif DWCA structure to IUCN SIS format

make_zip(): Generate the SIS connect zip file

map_species_batch(): Display a leaflet map to show the distribution of occurrence data for each species Batch version that iterates through species

map_species_single(): Display a leaflet map to show the distribution of occurrence data for each species

search_name_gbif(): Query taxon name against GBIF backbone

search_name_powo(): Query taxon name against POWO (Plants of the World Online) backbone

sis_allfields(): Generate the allfields.csv file

sis_assessments(): Generate the assessments.csv file

sis_countries(): Generate the countries.csv file

sis_credits(): Generate the credits.csv file

sis_habitats(): Generate the habitats.csv file

sis_plantspecific(): Generate the plantspecific.csv file

sis_references(): Generate the references.csv file

sis_taxonomy(): Generate the taxonomy.csv file