Transform SIS export tables and occurrence data into per-species JSON files

Transform SIS export tables and occurrence data into per-species JSON files

Usage

make_json(sis_files, occs, out_dir = "output", combined = FALSE)

Arguments

sis_files

Named list of data frames: allfields, assessments, countries, plantspecific, taxonomy

occs

Data frame of occurrence records with columns: internal_taxon_id, sci_name, recordedby, recordno, day, month, event_year, dec_lat, dec_long, locality, coorduncert, dist_comm, basisofrec, min_elev, catalog_no, source, yrcompiled, citation, compiler, data_sens, sens_comm, presence, origin, seasonal, spatialref, latitude, longitude

out_dir

Directory to write JSON files to (default: "output")

combined

If TRUE, writes a single assessments.json containing all species as an array. If FALSE (default), writes one JSON file per species named by species_slug.

Value

Invisibly returns a named list of all species JSON objects